Characterization of whole genome radiation hybrid mapping resources for non-mammalian vertebrates.

نویسندگان

  • C Kwok
  • R M Korn
  • M E Davis
  • D W Burt
  • R Critcher
  • L McCarthy
  • B H Paw
  • L I Zon
  • P N Goodfellow
  • K Schmitt
چکیده

Radiation hybrid panels are already available for genome mapping in human and mouse. In this study we have used two model organisms (chicken and zebrafish) to show that hybrid panels that contain a full complement of the donor genome can be generated by fusion to hamster cells. The quality of the resulting hybrids has been assessed using PCR and FISH. We confirmed the utility of our panels by establishing the percentage of donor DNA present in the hybrids. Our hybrid resources will allow inexpensive gene mapping and we expect that this technology can be transferred to many other species. Such successes are providing the basis for a new era of mapping tools, in the form of whole genome radiation hybrid panels, and are opening new possibilities for systematic genome analysis in the animal genetics community.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Phylogenetic Analysis of Three Long Non-coding RNA Genes: AK082072, AK043754 and AK082467

Now, it is clear that protein is just one of the most functional products produced by the eukaryotic genome. Indeed, a major part of the human genome is transcribed to non-coding sequences than to the coding sequence of the protein. In this study, we selected three long non-coding RNAs namely AK082072, AK043754 and AK082467 which show brain expression and local region conservation among vertebr...

متن کامل

Reassignment of Mycs gene to mouse chromosome XA1.2-2 by radiation hybrid mapping and fluorescence in situ hybridization.

The mouse Mycs gene is a member of the intronless Myc gene family. Both human and rat Mycs genes have been mapped to chromosome X (Moton et al., 1989; Serikawa et al., 1992), while the mouse Mycs was initially localized by fluorescence in situ hybridization (FISH) to chromosome 19B (Sugiyama et al., 1999). The apoptosis-inducing activity of intronless Myc genes is evolutionarily conserved in ma...

متن کامل

P87: The Role of the Long Non-Coding RNA Sequences (LncRNAs) in Neurological Disorders

Precise interpretation of the transcriptome sequences in the several species showed that the major part of genome has been transcribed; however, just a few amounts of the transcription sequences have open-reading frames which are conversed during the evolution. So, it is unlikely that many of the transcribed sequences code the proteins. Among the all human non-coding transcripts, at least 10000...

متن کامل

Wide-cross whole-genome radiation hybrid mapping of cotton (Gossypium hirsutum L.).

We report the development and characterization of a "wide-cross whole-genome radiation hybrid" (WWRH) panel from cotton (Gossypium hirsutum L.). Chromosomes were segmented by gamma-irradiation of G. hirsutum (n = 26) pollen, and segmented chromosomes were rescued after in vivo fertilization of G. barbadense egg cells (n = 26). A 5-krad gamma-ray WWRH mapping panel (N = 93) was constructed and g...

متن کامل

BAC Libraries: Precious Resources for Marsupial and Monotreme Comparative Genomics

Over the past decade, the construction of Bacterial Artificial Chromosome (BAC) libraries has revolutionized gene mapping in marsupials and monotremes, and has been invaluable for genome sequencing, either for sequencing target regions or as part of whole genome sequencing projects, making it possible to include representatives from these two major groups of mammals in comparative genomics stud...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Nucleic acids research

دوره 26 15  شماره 

صفحات  -

تاریخ انتشار 1998